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Y. Leung", "links": { "alternate": { "href": "https://www.zotero.org/marcus314", "type": "text/html" } } }, "creatorSummary": "Shin et al.", "parsedDate": "2015", "numChildren": 0 }, "data": { "key": "MRNXZ7VW", "version": 5, "itemType": "journalArticle", "title": "The first microbial environment of infants born by C-section: the operating room microbes", "creators": [ { "creatorType": "author", "firstName": "Hakdong", "lastName": "Shin" }, { "creatorType": "author", "firstName": "Zhiheng", "lastName": "Pei" }, { "creatorType": "author", "firstName": "Keith A.", "lastName": "Martinez" }, { "creatorType": "author", "firstName": "Juana I.", "lastName": "Rivera-Vinas" }, { "creatorType": "author", "firstName": "Keimari", "lastName": "Mendez" }, { "creatorType": "author", "firstName": "Humberto", "lastName": "Cavallin" }, { "creatorType": "author", "firstName": "Maria G.", "lastName": "Dominguez-Bello" } ], "abstractNote": "", "publicationTitle": "Microbiome", "publisher": "", "place": "", "date": "12/2015", "volume": "3", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "59", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Microbiome", "DOI": "10.1186/s40168-015-0126-1", "citationKey": "", "url": "http://www.microbiomejournal.com/content/3/1/59", "accessDate": "2015-12-08T02:13:03Z", "PMID": "", "PMCID": "", "ISSN": "2049-2618", "archive": "", "archiveLocation": "", "shortTitle": "The first microbial environment of infants born by C-section", "language": "en", "libraryCatalog": "CrossRef", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [ "WUX53GGF" ], "relations": {}, "dateAdded": "2016-10-06T07:36:05Z", "dateModified": "2016-10-06T07:36:05Z" } }, { "key": "VDSZGJ97", "version": 5, "library": { "type": "group", "id": 739627, "name": "Built Environment - Lee Group", "links": { "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/739627/items/VDSZGJ97", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group/items/VDSZGJ97", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1666519, "username": "marcus314", "name": "Marcus H. Y. Leung", "links": { "alternate": { "href": "https://www.zotero.org/marcus314", "type": "text/html" } } }, "creatorSummary": "Potera", "parsedDate": "2015-10-01", "numChildren": 2 }, "data": { "key": "VDSZGJ97", "version": 5, "itemType": "journalArticle", "title": "Hospital's hidden environmental hazards: probing the microbiome", "creators": [ { "creatorType": "author", "firstName": "Carol", "lastName": "Potera" } ], "abstractNote": "", "publicationTitle": "BioScience", "publisher": "", "place": "", "date": "10/01/2015", "volume": "65", "issue": "10", "section": "", "partNumber": "", "partTitle": "", "pages": "1032-1032", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "BioScience", "DOI": "10.1093/biosci/biv116", "citationKey": "", "url": "http://bioscience.oxfordjournals.org/content/65/10/1032", "accessDate": "2015-11-19T18:51:45Z", "PMID": "", "PMCID": "", "ISSN": "0006-3568, 1525-3244", "archive": "", "archiveLocation": "", "shortTitle": "Hospital's Hidden Environmental Hazards", "language": "en", "libraryCatalog": "bioscience.oxfordjournals.org", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [ "WUX53GGF" ], "relations": {}, "dateAdded": "2016-10-06T07:36:05Z", "dateModified": "2016-10-06T07:36:05Z" } }, { "key": "R26P68KC", "version": 5, "library": { "type": "group", "id": 739627, "name": "Built Environment - Lee Group", "links": { "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/739627/items/R26P68KC", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group/items/R26P68KC", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1666519, "username": "marcus314", "name": "Marcus H. Y. Leung", "links": { "alternate": { "href": "https://www.zotero.org/marcus314", "type": "text/html" } } }, "creatorSummary": "Dedesko et al.", "parsedDate": "2015-08", "numChildren": 1 }, "data": { "key": "R26P68KC", "version": 5, "itemType": "journalArticle", "title": "Methods to assess human occupancy and occupant activity in hospital patient rooms", "creators": [ { "creatorType": "author", "firstName": "Sandra", "lastName": "Dedesko" }, { "creatorType": "author", "firstName": "Brent", "lastName": "Stephens" }, { "creatorType": "author", "firstName": "Jack A.", "lastName": "Gilbert" }, { "creatorType": "author", "firstName": "Jeffrey A.", "lastName": "Siegel" } ], "abstractNote": "Human occupants have a profound influence on indoor environments, although there is limited information on means to cost-effectively assess occupant metrics in all types of buildings. Multiple measures of occupancy (i.e., the number of occupants and the duration of their presence) and occupant activity (i.e., the number of occupant movements through room doorways) were investigated in ten single-patient rooms in a new hospital in Chicago, Illinois as part of the Hospital Microbiome Project, with the overarching goal of determining occupant characteristics to inform an investigation of interactions between humans and microbial communities. Four relatively low-cost, non-invasive methods to estimate time-resolved occupancy and occupant activity were developed using data from (1) CO2 concentration sensors installed in patient rooms and the supply air streams serving each room and (2) non-directional doorway beam-break sensors installed at each patient room doorway. A method that utilized data from both sensors produced the most accurate estimates and was used to characterize time-varying occupancy and occupant activity. Daily occupancy varied among rooms, with median values ranging from 0 to 3 persons per hour. Occupant activity exhibited less variation on average (approximately 8 doorway movements per hour), but reached high levels on certain days for some patient rooms. No consistent relationship was observed between estimated occupancy and occupant activity, indicating that one metric cannot be inferred from the other. This study shows that this dual-sensor methodology provides a relatively inexpensive, non-invasive, accurate approach to estimate occupancy and occupant activity in an environment with rigorous privacy and security limitations.", "publicationTitle": "Building and Environment", "publisher": "", "place": "", "date": "August 2015", "volume": "90", "issue": "", "section": "", "partNumber": "", "partTitle": "", "pages": "136-145", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Building and Environment", "DOI": "10.1016/j.buildenv.2015.03.029", "citationKey": "", "url": "http://www.sciencedirect.com/science/article/pii/S036013231500147X", "accessDate": "2015-08-04T07:36:17Z", "PMID": "", "PMCID": "", "ISSN": "0360-1323", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "ScienceDirect", "callNumber": "", "rights": "", "extra": "", "tags": [ { "tag": "Carbon dioxide concentrations", "type": 1 }, { "tag": "Doorway beam-break sensors", "type": 1 }, { "tag": "Healthcare environments", "type": 1 }, { "tag": "Indoor microbiome", "type": 1 }, { "tag": "Room occupants", "type": 1 } ], "collections": [ "WUX53GGF" ], "relations": {}, "dateAdded": "2016-10-06T07:36:05Z", "dateModified": "2016-10-06T07:36:05Z" } }, { "key": "9R3RJ9FH", "version": 5, "library": { "type": "group", "id": 739627, "name": "Built Environment - Lee Group", "links": { "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/739627/items/9R3RJ9FH", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/built_environment_-_lee_group/items/9R3RJ9FH", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1666519, "username": "marcus314", "name": "Marcus H. Y. Leung", "links": { "alternate": { "href": "https://www.zotero.org/marcus314", "type": "text/html" } } }, "creatorSummary": "Poza et al.", "parsedDate": "2012-08-29", "numChildren": 1 }, "data": { "key": "9R3RJ9FH", "version": 5, "itemType": "journalArticle", "title": "Exploring bacterial diversity in hospital environments by GS-FLX titanium pyrosequencing", "creators": [ { "creatorType": "author", "firstName": "Margarita", "lastName": "Poza" }, { "creatorType": "author", "firstName": "Carmen", "lastName": "Gayoso" }, { "creatorType": "author", "firstName": "Manuel J.", "lastName": "Gómez" }, { "creatorType": "author", "firstName": "Soraya", "lastName": "Rumbo-Feal" }, { "creatorType": "author", "firstName": "María", "lastName": "Tomás" }, { "creatorType": "author", "firstName": "Jesús", "lastName": "Aranda" }, { "creatorType": "author", "firstName": "Ana", "lastName": "Fernández" }, { "creatorType": "author", "firstName": "Germán", "lastName": "Bou" } ], "abstractNote": "Understanding microbial populations in hospital environments is crucial for improving human health. Hospital-acquired infections are an increasing problem in intensive care units (ICU). In this work we present an exploration of bacterial diversity at inanimate surfaces of the ICU wards of the University Hospital A Coruña (Spain), as an example of confined hospital environment subjected to selective pressure, taking the entrance hall of the hospital, an open and crowded environment, as reference. Surface swab samples were collected from both locations and recovered DNA used as template to amplify a hypervariable region of the bacterial 16S rRNA gene. Sequencing of the amplicons was performed at the Roche 454 Sequencing Center using GS-FLX Titanium procedures. Reads were pre-processed and clustered into OTUs (operational taxonomic units), which were further classified. A total of 16 canonical bacterial phyla were detected in both locations. Members of the phyla Firmicutes (mainly Staphylococcus and Streptococcus) and Actinobacteria (mainly Micrococcaceae, Corynebacteriaceae and Brevibacteriaceae) were over-represented in the ICU with respect to the Hall. The phyllum Proteobacteria was also well represented in the ICU, mainly by members of the families Enterobacteriaceae, Methylobacteriaceae and Sphingomonadaceae. In the Hall sample, the phyla Proteobacteria, Bacteroidetes, Deinococcus-Thermus and Cyanobacteria were over-represented with respect to the ICU. Over-representation of Proteobacteria was mainly due to the high abundance of Enterobacteriaceae members. The presented results demonstrate that bacterial diversity differs at the ICU and entrance hall locations. Reduced diversity detected at ICU, relative to the entrance hall, can be explained by its confined character and by the existence of antimicrobial selective pressure. This is the first study using deep sequencing techniques made in hospital wards showing substantial hospital microbial diversity.", "publicationTitle": "PLoS ONE", "publisher": "", "place": "", "date": "August 29, 2012", "volume": "7", "issue": "8", "section": "", "partNumber": "", "partTitle": "", "pages": "e44105", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "PLoS ONE", "DOI": "10.1371/journal.pone.0044105", "citationKey": "", "url": "http://dx.doi.org/10.1371/journal.pone.0044105", "accessDate": "2015-08-03T04:02:51Z", "PMID": "", "PMCID": "", "ISSN": "", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "PLoS Journals", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [ "WUX53GGF" ], "relations": {}, "dateAdded": "2016-10-06T07:36:05Z", "dateModified": "2016-10-06T07:36:05Z" } } ]