[ { "key": "TEK29ZJI", "version": 2225, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/TEK29ZJI", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/TEK29ZJI", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "creatorSummary": "Holding et al.", "parsedDate": "2020", "numChildren": 0 }, "data": { "key": "TEK29ZJI", "version": 2225, "itemType": "journalArticle", "title": "Tick-Borne Encephalitis Virus, United Kingdom", "creators": [ { "creatorType": "author", "firstName": "Maya", "lastName": "Holding" }, { "creatorType": "author", "firstName": "Stuart D.", "lastName": "Dowall" }, { "creatorType": "author", "firstName": "Jolyon M.", "lastName": "Medlock" }, { "creatorType": "author", "firstName": "Daniel P.", "lastName": "Carter" }, { "creatorType": "author", "firstName": "Steven T.", "lastName": "Pullan" }, { "creatorType": "author", "firstName": "James", "lastName": "Lewis" }, { "creatorType": "author", "firstName": "Richard", "lastName": "Vipond" }, { "creatorType": "author", "firstName": "Mara S.", "lastName": "Rocchi" }, { "creatorType": "author", "firstName": "Matthew", "lastName": "Baylis" }, { "creatorType": "author", "firstName": "Roger", "lastName": "Hewson" } ], "abstractNote": "", "publicationTitle": "Emerging Infectious Diseases", "publisher": "", "place": "", "date": "01/2020", "volume": "26", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "90-96", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Emerg. Infect. Dis.", "DOI": "10.3201/eid2601.191085", "citationKey": "", "url": "http://wwwnc.cdc.gov/eid/article/26/1/19-1085_article.htm", "accessDate": "2023-09-11T13:21:33Z", "PMID": "", "PMCID": "", "ISSN": "1080-6040, 1080-6059", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "DOI.org (Crossref)", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [ "H4MVSNLH" ], "relations": {}, "dateAdded": "2023-09-11T13:21:33Z", "dateModified": "2023-09-11T13:21:33Z" } }, { "key": "8HPYE28W", "version": 2224, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/8HPYE28W", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/8HPYE28W", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "creatorSummary": "Leal et al.", "parsedDate": "2020-06", "numChildren": 0 }, "data": { "key": "8HPYE28W", "version": 2224, "itemType": "journalArticle", "title": "Questing by Tick Larvae (Acari: Ixodidae): A Review of the Influences That Affect Off-Host Survival", "creators": [ { "creatorType": "author", "firstName": "Brenda", "lastName": "Leal" }, { "creatorType": "author", "firstName": "Emily", "lastName": "Zamora" }, { "creatorType": "author", "firstName": "Austin", "lastName": "Fuentes" }, { "creatorType": "author", "firstName": "Donald B", "lastName": "Thomas" }, { "creatorType": "author", "firstName": "Robert K", "lastName": "Dearth" } ], "abstractNote": "Questing is a host-seeking behavior in which ticks ascend plants, extend their front legs, and wait poised for a chance to attach to a passing host. Hard ticks are ectoparasites of terrestrial vertebrates and because some species vector disease, they are among the most medically important of arthropod pests. All ixodid ticks require blood to survive and reproduce with the number of blood-hosts needed to complete their life cycle varying among species. The vast majority are three-host ticks requiring a different host for each developmental stage: larva, nymph, and adult. A few, including some of the most economically important species, are one-host ticks, that quest only in the larval stage. Questing is a rate-limiting behavior critical to tick survival and disease transmission. For the off-host larval stage, survival is highly dependent on ecological and physiological factors. Yet, off-host larval ecophysiology is often overlooked for the more obvious adult and nymphal tick-host interactions. This review summarizes the literature on ixodid larval questing with emphasis on how specific biotic and abiotic factors affect off-host survival.", "publicationTitle": "Annals of the Entomological Society of America", "publisher": "", "place": "", "date": "2020-06", "volume": "113", "issue": "6", "section": "", "partNumber": "", "partTitle": "", "pages": "425-438", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "10.1093/aesa/saaa013", "citationKey": "", "url": "https://doi.org/10.1093/aesa/saaa013", "accessDate": "", "PMID": "", "PMCID": "", "ISSN": "0013-8746", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "", "callNumber": "", "rights": "", "extra": "_eprint: https://academic.oup.com/aesa/article-pdf/113/6/425/34428951/saaa013.pdf", "tags": [], "collections": [ "H4MVSNLH" ], "relations": {}, "dateAdded": "2023-09-11T12:06:21Z", "dateModified": "2023-09-11T12:06:21Z" } }, { "key": "NMAVTM4Q", "version": 2222, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/NMAVTM4Q", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/NMAVTM4Q", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "creatorSummary": "Friedman", "parsedDate": "2001-10-01", "numChildren": 0 }, "data": { "key": "NMAVTM4Q", "version": 2222, "itemType": "journalArticle", "title": "Greedy function approximation: A gradient boosting machine.", "creators": [ { "creatorType": "author", "firstName": "Jerome H.", "lastName": "Friedman" } ], "abstractNote": "", "publicationTitle": "The Annals of Statistics", "publisher": "", "place": "", "date": "2001-10-1", "volume": "29", "issue": "5", "section": "", "partNumber": "", "partTitle": "", "pages": "", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Ann. Statist.", "DOI": "10.1214/aos/1013203451", "citationKey": "", "url": "https://projecteuclid.org/journals/annals-of-statistics/volume-29/issue-5/Greedy-function-approximation-A-gradient-boosting-machine/10.1214/aos/1013203451.full", "accessDate": "2023-09-01T13:42:20Z", "PMID": "", "PMCID": "", "ISSN": "0090-5364", "archive": "", "archiveLocation": "", "shortTitle": "Greedy function approximation", "language": "", "libraryCatalog": "DOI.org (Crossref)", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [], "relations": {}, "dateAdded": "2023-09-01T13:42:20Z", "dateModified": "2023-09-01T13:42:20Z" } }, { "key": "RPICBMHT", "version": 2221, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/RPICBMHT", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/RPICBMHT", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "creatorSummary": "De Pelsmaeker et al.", "parsedDate": "2021-03-18", "numChildren": 0 }, "data": { "key": "RPICBMHT", "version": 2221, "itemType": "journalArticle", "title": "High-elevational occurrence of two tick species, Ixodes ricinus and I. trianguliceps, at their northern distribution range", "creators": [ { "creatorType": "author", "firstName": "Nicolas", "lastName": "De Pelsmaeker" }, { "creatorType": "author", "firstName": "Lars", "lastName": "Korslund" }, { "creatorType": "author", "firstName": "Øyvind", "lastName": "Steifetten" } ], "abstractNote": "Abstract\n \n Background\n \n During the last decades a northward and upward range shift has been observed among many organisms across different taxa. In the northern hemisphere, ticks have been observed to have increased their latitudinal and altitudinal range limit. However, the elevational expansion at its northern distribution range remains largely unstudied. In this study we investigated the altitudinal distribution of the exophilic\n Ixodes ricinus\n and endophilic\n I. trianguliceps\n on two mountain slopes in Norway by assessing larval infestation rates on bank voles (\n Myodes glareolus\n ).\n \n \n \n Methods\n During 2017 and 2018, 1325 bank voles were captured during the spring, summer and autumn at ten trapping stations ranging from 100 m to 1000 m.a.s.l. in two study areas in southern Norway. We used generalized logistic regression models to estimate the prevalence of infestation of both tick species along gradients of altitude, considering study area, collection year and season, temperature, humidity and altitude interactions as extrinsic variables, and host body mass and sex as intrinsic predictor variables.\n \n \n Results\n \n We found that both\n I. ricinus\n and\n I. trianguliceps\n infested bank voles at altitudes up to 1000 m.a.s.l., which is a substantial increase in altitude compared to previous findings for\n I. ricinus\n in this region. The infestation rates declined more rapidly with increasing altitude for\n I. ricinus\n compared to\n I. trianguliceps\n , indicating that the endophilic ecology of\n I. trianguliceps\n may provide shelter from limiting factors tied to altitude. Seasonal effects limited the occurrence of\n I. ricinus\n during autumn, but\n I. trianguliceps\n was found to infest rodents at all altitudes during all seasons of both years.\n \n \n \n Conclusions\n This study provides new insights into the altitudinal distribution of two tick species at their northern distribution range, one with the potential to transmit zoonotic pathogens to both humans and livestock. With warming temperatures predicted to increase, and especially so in the northern regions, the risk of tick-borne infections is likely to become a concern at increasingly higher altitudes in the future.\n \n \n Graphical Abstract", "publicationTitle": "Parasites & Vectors", "publisher": "", "place": "", "date": "2021-03-18", "volume": "14", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "161", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Parasites Vectors", "DOI": "10.1186/s13071-021-04604-w", "citationKey": "", "url": "https://parasitesandvectors.biomedcentral.com/articles/10.1186/s13071-021-04604-w", "accessDate": "2023-09-01T07:58:36Z", "PMID": "", "PMCID": "", "ISSN": "1756-3305", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "en", "libraryCatalog": "DOI.org (Crossref)", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [], "relations": {}, "dateAdded": "2023-09-01T07:58:36Z", "dateModified": "2023-09-01T07:58:36Z" } }, { "key": "D9EUDZMG", "version": 2228, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/D9EUDZMG", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/D9EUDZMG", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Heidenberger and Unshelm", "parsedDate": "1990-02", "numChildren": 1 }, "data": { "key": "D9EUDZMG", "version": 2228, "itemType": "journalArticle", "title": "[Changes in the behavior of dogs after castration]", "creators": [ { "creatorType": "author", "firstName": "E.", "lastName": "Heidenberger" }, { "creatorType": "author", "firstName": "J.", "lastName": "Unshelm" } ], "abstractNote": "This study is based upon a written survey of keepers of neutered dogs about the behaviour of 209 male and 382 female dogs. The main findings are: Male dogs show behavioural changes after castration more often and more distinctly than female dogs after neutering. Behavioural problems in most cases are reduced or have even disappeared after neutering (male dogs 74%, female dogs 59%). At best, hypersexuality and connected problems are changed as expected. 49 of 80 aggressive male dogs and 25 of 47 female dogs are more gentle after neutering. 10 bitches appeared to be aggressive only after being neutered. Particularly feeding behaviour changes in 42% of the male dogs and 32% of the female dogs towards an increased intake of food, which also leads to an increase in body weight. This corresponds to decreasing activity, which is indicated by increasing time of rest (male dogs 36%, female dogs 18%) and decreasing motivation to move. Motivation for playing, watchfulness and perseverance change more seldomly and sometimes increase. The character of the neutered animals is predominantly described as \"devoted, friendly and kind\". Changes of behaviour following neutering depend on many influencing factors. Above all effective obedience training, but also the family situation of the owner, time factors, conditions of keeping and contact with other dogs have different impacts on the control of the individual behavioural problems.", "publicationTitle": "Tierarztliche Praxis", "publisher": "", "place": "", "date": "1990-02", "volume": "18", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "69-75", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Tierarztl Prax", "DOI": "", "citationKey": "", "url": "", "accessDate": "", "PMID": "2326799", "PMCID": "", "ISSN": "0303-6286", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "ger", "libraryCatalog": "PubMed", "callNumber": "", "rights": "", "extra": "", "tags": [ { "tag": "Aggression", "type": 1 }, { "tag": "Animals", "type": 1 }, { "tag": "Behavior, Animal", "type": 1 }, { "tag": "Body Weight", "type": 1 }, { "tag": "Dogs", "type": 1 }, { "tag": "Eating", "type": 1 }, { "tag": "Female", "type": 1 }, { "tag": "Male", "type": 1 }, { "tag": "Motor Activity", "type": 1 }, { "tag": "Orchiectomy", "type": 1 }, { "tag": "Ovariectomy", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2023-08-31T13:25:18Z", "dateModified": "2023-08-31T13:25:18Z" } }, { "key": "XE7V3RRC", "version": 2220, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/XE7V3RRC", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/XE7V3RRC", "type": "text/html" }, "up": { "href": "https://api.zotero.org/groups/1493/items/D9EUDZMG", "type": "application/json" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } } }, "data": { "key": "XE7V3RRC", "version": 2220, "parentItem": "D9EUDZMG", "itemType": "attachment", "linkMode": "linked_url", "title": "PubMed entry", "accessDate": "2023-08-31T13:25:18Z", "url": "http://www.ncbi.nlm.nih.gov/pubmed/2326799", "note": "", "contentType": "text/html", "charset": "", "tags": [], "relations": {}, "dateAdded": "2023-08-31T13:25:18Z", "dateModified": "2023-08-31T13:25:18Z" } }, { "key": "W9QV5XFC", "version": 2219, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/W9QV5XFC", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/W9QV5XFC", "type": "text/html" } }, "meta": { "createdByUser": { "id": 1704708, "username": "Elena Arsevska", "name": "", "links": { "alternate": { "href": "https://www.zotero.org/elena_arsevska", "type": "text/html" } } }, "creatorSummary": "Walker", "parsedDate": "2018-04-11", "numChildren": 0 }, "data": { "key": "W9QV5XFC", "version": 2219, "itemType": "journalArticle", "title": "The hedgehog tick, Ixodes hexagonus (Leach, 1815) (Acari: Ixodidae); The natural history and ecology of a nest ectoparasite", "creators": [ { "creatorType": "author", "firstName": "Mark David", "lastName": "Walker" } ], "abstractNote": "Little is known about the biology of the tick, Ixodes hexagonus Leach 1815 a nest ectoparasite of hedgehogs. This is surprising as it is frequently encountered on domestic pets and is a known vector of various tick borne pathogens. This review examines the biology, life-history and population dynamics of I. hexagonus. The ability of I. hexagonus to transmit pathogens between hedgehog hosts means it could play an important role in the persistence of tick borne diseases. The favoured hedgehog hosts of I. hexagonus are frequently found in suburban habitats, thus it may be important in the maintenance of disease cycles in such areas.", "publicationTitle": "Systematic and Applied Acarology", "publisher": "", "place": "", "date": "2018-04-11", "volume": "23", "issue": "4", "section": "", "partNumber": "", "partTitle": "", "pages": "680", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "saa", "DOI": "10.11158/saa.23.4.9", "citationKey": "", "url": "https://biotaxa.org/saa/article/view/saa.23.4.9", "accessDate": "2023-08-31T09:29:57Z", "PMID": "", "PMCID": "", "ISSN": "1362-1971", "archive": "", "archiveLocation": "", "shortTitle": "The hedgehog tick, Ixodes hexagonus (Leach, 1815) (Acari", "language": "", "libraryCatalog": "DOI.org (Crossref)", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [], "relations": {}, "dateAdded": "2023-08-31T09:29:57Z", "dateModified": "2023-08-31T09:29:57Z" } }, { "key": "RGY4SELQ", "version": 2218, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/RGY4SELQ", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/RGY4SELQ", "type": "text/html" } }, "meta": { "createdByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "numChildren": 0 }, "data": { "key": "RGY4SELQ", "version": 2218, "itemType": "webpage", "title": "Schibsted-tili", "creators": [], "abstractNote": "", "websiteTitle": "", "websiteType": "", "date": "", "publisher": "", "place": "", "DOI": "", "citationKey": "", "url": "https://login.schibsted.fi/authn/?client_sdrn=sdrn%3Aschibsted.fi%3Aclient%3A5ff2c4be6104e22404be32c7&nonce=09ce6ab3-48a7-4e79-801e-1995db3be182&state=5b8b29de84abbff17a516fff4892c660ba0ce020b2e99f6b974b1b41ac1e5ec42819ef1656f3ee85c0c2db2e22631501bb1e065053ee0c545a258c277f452181ad308019020ebfcdc700f3c4ee1269aa33c7e84f91c62fa5b279c8a80febfe7d54085c6fd6005727957102bf83cc48d5304805aaada4b388243a10cc7db37f42&prompt=select_account&client_id=5ff2c4be6104e22404be32c7", "accessDate": "2021-05-21T09:19:58Z", "shortTitle": "", "language": "", "rights": "", "extra": "", "tags": [], "collections": [], "relations": {}, "dateAdded": "2021-05-21T09:19:58Z", "dateModified": "2021-05-21T09:19:58Z" } }, { "key": "K4AIFJYY", "version": 2217, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/K4AIFJYY", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/K4AIFJYY", "type": "text/html" } }, "meta": { "createdByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Gunaratne et al.", "parsedDate": "2021-05-13", "numChildren": 0 }, "data": { "key": "K4AIFJYY", "version": 2217, "itemType": "journalArticle", "title": "Combined Oral Contraceptive Pill-Induced Hypertension and Hypertensive Disorders of Pregnancy: Shared Mechanisms and Clinical Similarities", "creators": [ { "creatorType": "author", "firstName": "Madugodaralalage D. S. K.", "lastName": "Gunaratne" }, { "creatorType": "author", "firstName": "Bjorg", "lastName": "Thorsteinsdottir" }, { "creatorType": "author", "firstName": "Vesna D.", "lastName": "Garovic" } ], "abstractNote": "Oral contraceptive pill-induced hypertension (OCPIH) and hypertensive disorders in pregnancy (HDP) share common risk factors and pathophysiological mechanisms, yet the bidirectional relationship between these two conditions is not well-established. We review and describe OCPIH and HDP to better understand how hormonal and metabolic imbalances affect hypertension.", "publicationTitle": "Current Hypertension Reports", "publisher": "", "place": "", "date": "2021-05-13", "volume": "23", "issue": "5", "section": "", "partNumber": "", "partTitle": "", "pages": "29", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Curr Hypertens Rep", "DOI": "10.1007/s11906-021-01147-4", "citationKey": "", "url": "https://doi.org/10.1007/s11906-021-01147-4", "accessDate": "2021-05-21T08:25:44Z", "PMID": "", "PMCID": "", "ISSN": "1534-3111", "archive": "", "archiveLocation": "", "shortTitle": "Combined Oral Contraceptive Pill-Induced Hypertension and Hypertensive Disorders of Pregnancy", "language": "en", "libraryCatalog": "Springer Link", "callNumber": "", "rights": "", "extra": "", "tags": [], "collections": [], "relations": {}, "dateAdded": "2021-05-21T08:25:44Z", "dateModified": "2021-05-21T08:25:44Z" } }, { "key": "VFTTJKEG", "version": 2217, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/VFTTJKEG", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/VFTTJKEG", "type": "text/html" }, "up": { "href": "https://api.zotero.org/groups/1493/items/886D2IR2", "type": "application/json" } }, "meta": { "createdByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } } }, "data": { "key": "VFTTJKEG", "version": 2217, "parentItem": "886D2IR2", "itemType": "attachment", "linkMode": "linked_url", "title": "PubMed entry", "accessDate": "2021-05-21T08:25:34Z", "url": "http://www.ncbi.nlm.nih.gov/pubmed/33982185", "note": "", "contentType": "text/html", "charset": "", "tags": [], "relations": {}, "dateAdded": "2021-05-21T08:25:34Z", "dateModified": "2021-05-21T08:25:34Z" } }, { "key": "886D2IR2", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/886D2IR2", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/886D2IR2", "type": "text/html" } }, "meta": { "createdByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Gunaratne et al.", "parsedDate": "2021-05-13", "numChildren": 1 }, "data": { "key": "886D2IR2", "version": 2226, "itemType": "journalArticle", "title": "Combined Oral Contraceptive Pill-Induced Hypertension and Hypertensive Disorders of Pregnancy: Shared Mechanisms and Clinical Similarities", "creators": [ { "creatorType": "author", "firstName": "Madugodaralalage D. S. K.", "lastName": "Gunaratne" }, { "creatorType": "author", "firstName": "Bjorg", "lastName": "Thorsteinsdottir" }, { "creatorType": "author", "firstName": "Vesna D.", "lastName": "Garovic" } ], "abstractNote": "PURPOSE OF REVIEW: Oral contraceptive pill-induced hypertension (OCPIH) and hypertensive disorders in pregnancy (HDP) share common risk factors and pathophysiological mechanisms, yet the bidirectional relationship between these two conditions is not well-established. We review and describe OCPIH and HDP to better understand how hormonal and metabolic imbalances affect hypertension.\nRECENT FINDINGS: Oral contraceptive pills continue to be a popular method of contraception, with an incidence of OCPIH ranging from 1-8.5% among OCP users. HDP have an incidence of 5-10% of all pregnancies in the USA and have been shown to be a powerful predictor of lifetime adverse cardiovascular outcomes, including future hypertension. OCPIH and HDP share common risk factors such as age, BMI, past personal and family history of hypertension, as well as pathogenic mechanisms, including alterations in hormonal metabolism and the renin angiotensin aldosterone system; imbalance of vasodilator-vasoconstrictor compounds; and changes in the cardiovascular system. Future research should address additional potential mechanisms that underlie hypertension in these two conditions where endocrine changes, either physiological (pregnancy) or iatrogenic (use of OCP), play a role. This may lead to novel, targeted treatment options to improve hypertension management and overall cardiovascular risk profile management in this subset of young female patients.", "publicationTitle": "Current Hypertension Reports", "publisher": "", "place": "", "date": "2021-05-13", "volume": "23", "issue": "5", "section": "", "partNumber": "", "partTitle": "", "pages": "29", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Curr Hypertens Rep", "DOI": "10.1007/s11906-021-01147-4", "citationKey": "", "url": "", "accessDate": "", "PMID": "33982185", "PMCID": "PMC8127613", "ISSN": "1534-3111", "archive": "", "archiveLocation": "", "shortTitle": "Combined Oral Contraceptive Pill-Induced Hypertension and Hypertensive Disorders of Pregnancy", "language": "eng", "libraryCatalog": "PubMed", "callNumber": "", "rights": "", "extra": "", "tags": [ { "tag": "Cardiovascular System", "type": 1 }, { "tag": "Contraceptives, Oral, Combined", "type": 1 }, { "tag": "Drug-induced hypertension", "type": 1 }, { "tag": "Female", "type": 1 }, { "tag": "Gestational hypertension", "type": 1 }, { "tag": "Hormone treatment", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Hypertension, Pregnancy-Induced", "type": 1 }, { "tag": "Preeclampsia", "type": 1 }, { "tag": "Pregnancy", "type": 1 }, { "tag": "Renin-Angiotensin System", "type": 1 }, { "tag": "Risk Factors", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2021-05-21T08:25:33Z", "dateModified": "2021-05-21T08:25:33Z" } }, { "key": "YUFQY9NS", "version": 2216, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/YUFQY9NS", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/YUFQY9NS", "type": "text/html" } }, "meta": { "createdByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Surya et al.", "numChildren": 0 }, "data": { "key": "YUFQY9NS", "version": 2216, "itemType": "journalArticle", "title": "Monitoring for Myocarditis during Treatment Initiation with Clozapine", "creators": [ { "creatorType": "author", "firstName": "Sandarsh", "lastName": "Surya" }, { "creatorType": "author", "firstName": "Ram J.", "lastName": "Bishnoi" }, { "creatorType": "author", "firstName": "Reddy Beesam", "lastName": "Shashank" }, { "creatorType": "author", "firstName": "Brian J.", "lastName": "Miller" }, { "creatorType": "author", "firstName": "Oliver", "lastName": "Freudenreich" }, { "creatorType": "author", "firstName": "Joseph P.", "lastName": "McEvoy" } ], "abstractNote": "Objective Clozapine use is associated with myocarditis. In this study, we investigated what clinical signs and symptoms, and/or laboratory test(s), alert clinicians to presumptive myocarditis (PrMy) most accurately and at the earliest time point. We also investigated the incidence of PrMy during the initial exposure to clozapine versus in patients restarted on clozapine after extended interruption of prior prolonged treatment. Methods 100 patients admitted to state psychiatric hospital started on clozapine were recruited into the study. 76 patients were treated with clozapine for the first time and 24 patients were restarts. Creatine Kinase (CK), troponin I (TROP), eosinophil count (EOS) and C-Reactive Protein (CRP) were obtained at baseline and weeks 1, 2, 3, and 4. Descriptive statistics were calculated for demographic and clinical variables. Student’s t-test and chi-squared test were used to compare means and proportions between initial exposure and restart groups. Results Clinical features and laboratory tests suggestive of PrMy were seen in 4 patients (5.3%) in initial exposure group and none in restart group. 3.5% of TROP levels were abnormal in initial exposure group and no abnormal levels were found in the restart group. 30% and 46% of CK, 23% and 39% of CRP, 14% and 23% of EOS were abnormal in initial exposure group and restart groups, respectively. Conclusions PrMy was common (5.3%) during clozapine initiation. Prospective management through serial laboratory monitoring with weekly TROP levels was sensitive enough to allow for timely clozapine discontinuation.", "publicationTitle": "Acta Psychiatrica Scandinavica", "publisher": "", "place": "", "date": "", "volume": "n/a", "issue": "n/a", "section": "", "partNumber": "", "partTitle": "", "pages": "", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "https://doi.org/10.1111/acps.13328", "citationKey": "", "url": "https://onlinelibrary.wiley.com/doi/abs/10.1111/acps.13328", "accessDate": "2021-05-21T07:38:02Z", "PMID": "", "PMCID": "", "ISSN": "1600-0447", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "en", "libraryCatalog": "Wiley Online Library", "callNumber": "", "rights": "This article is protected by copyright. All rights reserved.", "extra": "_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/acps.13328", "tags": [ { "tag": "C-reactive protein", "type": 1 }, { "tag": "Clozapine", "type": 1 }, { "tag": "creatine kinase", "type": 1 }, { "tag": "eosinophil", "type": 1 }, { "tag": "myocarditis", "type": 1 }, { "tag": "troponin I", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2021-05-21T07:38:02Z", "dateModified": "2021-05-21T07:38:02Z" } }, { "key": "ZDTAXIM8", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/ZDTAXIM8", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/ZDTAXIM8", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Coelho et al.", "parsedDate": "2008-04", "numChildren": 0 }, "data": { "key": "ZDTAXIM8", "version": 2226, "itemType": "journalArticle", "title": "Complete treatment of uncertainties in a model for dengue R0 estimation", "creators": [ { "creatorType": "author", "firstName": "Flávio Codeço", "lastName": "Coelho" }, { "creatorType": "author", "firstName": "Cláudia Torres", "lastName": "Codeço" }, { "creatorType": "author", "firstName": "Claudio José", "lastName": "Struchiner" } ], "abstractNote": "In real epidemic processes, the basic reproduction number R0 is the combined outcome of multiple probabilistic events. Nevertheless, it is frequently modeled as a deterministic function of epidemiological variables. This paper discusses the importance of adequate treatment of uncertainties in such models. This is done by comparing two methods of uncertainty analysis: Monte Carlo uncertainty analysis (MCUA) and the Bayesian melding (BM) method. These methods are applied to a model for the determination of R0 of dengue fever based on entomological parameters. The BM was shown to provide a complete treatment of the uncertainties associated with model parameters. In contrast to MCUA, the incorporation of uncertainties led to realistic posterior distributions for parameter and variables. The incorporation, by the BM, of all the available information, from observational data to expert opinions, allows for the constructive use of uncertainties generating informative posterior distributions for all of the model's components that are coherent as a set.", "publicationTitle": "Cadernos De Saúde Pública / Ministério Da Saúde, Fundação Oswaldo Cruz, Escola Nacional De Saúde Pública", "publisher": "", "place": "", "date": "Apr 2008", "volume": "24", "issue": "4", "section": "", "partNumber": "", "partTitle": "", "pages": "853-61", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Cad Saude Publica", "DOI": "S0102-311X2008000400016", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/18392363", "accessDate": "2008-10-21T12:14:09Z", "PMID": "18392363", "PMCID": "", "ISSN": "0102-311X", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0008", "rights": "", "extra": "00019", "tags": [ { "tag": "Bayes Theorem", "type": 1 }, { "tag": "Dengue", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Models, Statistical", "type": 1 }, { "tag": "Monte Carlo Method", "type": 1 }, { "tag": "uncertainty", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2009-09-25T09:13:07Z", "dateModified": "2017-11-07T18:17:11Z" } }, { "key": "XXJAKRMI", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/XXJAKRMI", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/XXJAKRMI", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "O'Neill", "parsedDate": "2009-10", "numChildren": 0 }, "data": { "key": "XXJAKRMI", "version": 2226, "itemType": "journalArticle", "title": "Bayesian inference for stochastic multitype epidemics in structured populations using sample data", "creators": [ { "creatorType": "author", "firstName": "Philip D", "lastName": "O'Neill" } ], "abstractNote": "This paper is concerned with the development of new methods for Bayesian statistical inference for structured-population stochastic epidemic models, given data in the form of a sample from a population with known structure. Specifically, the data are assumed to consist of final outcome information, so that it is known whether or not each individual in the sample ever became a clinical case during the epidemic outbreak. The objective is to make inference for the infection rate parameters in the underlying model of disease transmission. The principal challenge is that the required likelihood of the data is intractable in all but the simplest cases. Demiris and O'Neill (2005b) used data augmentation methods involving a certain random graph in a Markov chain Monte Carlo setting to address this situation in the special case where the sample is the same as the entire population. Here, we take an approach relying on broadly similar principles, but for which the implementation details are markedly different. Specifically, to cover the general case of sample data, we use an alternative data augmentation scheme and employ noncentering methods. The methods are illustrated using data from an influenza outbreak.", "publicationTitle": "Biostatistics (Oxford, England)", "publisher": "", "place": "", "date": "Oct 2009", "volume": "10", "issue": "4", "section": "", "partNumber": "", "partTitle": "", "pages": "779-791", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Biostatistics", "DOI": "10.1093/biostatistics/kxp031", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/19648227", "accessDate": "2009-09-24T12:19:49Z", "PMID": "19648227", "PMCID": "", "ISSN": "1468-4357", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0007", "rights": "", "extra": "00020", "tags": [], "collections": [], "relations": { "dc:replaces": "http://zotero.org/groups/1493/items/ENV5QQBG" }, "dateAdded": "2009-09-25T09:11:33Z", "dateModified": "2017-11-07T18:17:08Z" } }, { "key": "XPHIMZ62", "version": 2213, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/XPHIMZ62", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/XPHIMZ62", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 237886, "username": "edimar.garcia", "name": "Edimar Garcia", "links": { "alternate": { "href": "https://www.zotero.org/edimar.garcia", "type": "text/html" } } }, "creatorSummary": "Chowell et al.", "parsedDate": "2007-02-22", "numChildren": 0 }, "data": { "key": "XPHIMZ62", "version": 2213, "itemType": "journalArticle", "title": "Comparative estimation of the reproduction number for pandemic influenza from daily case notification data", "creators": [ { "creatorType": "author", "firstName": "Gerardo", "lastName": "Chowell" }, { "creatorType": "author", "firstName": "Hiroshi", "lastName": "Nishiura" }, { "creatorType": "author", "firstName": "Luís M.A", "lastName": "Bettencourt" } ], "abstractNote": "The reproduction number, , defined as the average number of secondary cases generated by a primary case, is a crucial quantity for identifying the intensity of interventions required to control an epidemic. Current estimates of the reproduction number for seasonal influenza show wide variation and, in particular, uncertainty bounds for for the pandemic strain from 1918 to 1919 have been obtained only in a few recent studies and are yet to be fully clarified. Here, we estimate using daily case notifications during the autumn wave of the influenza pandemic (Spanish flu) in the city of San Francisco, California, from 1918 to 1919. In order to elucidate the effects from adopting different estimation approaches, four different methods are used: estimation of using the early exponential-growth rate (Method 1), a simple susceptible–exposed–infectious–recovered (SEIR) model (Method 2), a more complex SEIR-type model that accounts for asymptomatic and hospitalized cases (Method 3), and a stochastic susceptible–infectious–removed (SIR) with Bayesian estimation (Method 4) that determines the effective reproduction number at a given time . The first three methods fit the initial exponential-growth phase of the epidemic, which was explicitly determined by the goodness-of-fit test. Moreover, Method 3 was also fitted to the whole epidemic curve. Whereas the values of obtained using the first three methods based on the initial growth phase were estimated to be 2.98 (95% confidence interval (CI): 2.73, 3.25), 2.38 (2.16, 2.60) and 2.20 (1.55, 2.84), the third method with the entire epidemic curve yielded a value of 3.53 (3.45, 3.62). This larger value could be an overestimate since the goodness-of-fit to the initial exponential phase worsened when we fitted the model to the entire epidemic curve, and because the model is established as an autonomous system without time-varying assumptions. These estimates were shown to be robust to parameter uncertainties, but the theoretical exponential-growth approximation (Method 1) shows wide uncertainty. Method 4 provided a maximum-likelihood effective reproduction number 2.10 (1.21, 2.95) using the first 17 epidemic days, which is consistent with estimates obtained from the other methods and an estimate of 2.36 (2.07, 2.65) for the entire autumn wave. We conclude that the reproduction number for pandemic influenza (Spanish flu) at the city level can be robustly assessed to lie in the range of 2.0–3.0, in broad agreement with previous estimates using distinct data.", "publicationTitle": "Journal of The Royal Society Interface", "publisher": "", "place": "", "date": "February 22, 2007", "volume": "4", "issue": "12", "section": "", "partNumber": "", "partTitle": "", "pages": "155-166", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "10.1098/rsif.2006.0161", "citationKey": "", "url": "http://rsif.royalsocietypublishing.org/content/4/12/155.abstract", "accessDate": "2009-09-24T12:27:54Z", "PMID": "", "PMCID": "", "ISSN": "", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "Highwire 2.0", "callNumber": "0143", "rights": "", "extra": "00221", "tags": [], "collections": [], "relations": { "dc:replaces": "http://zotero.org/groups/1493/items/8RXIENM6" }, "dateAdded": "2009-09-25T09:11:33Z", "dateModified": "2017-11-07T18:17:05Z" } }, { "key": "X9B7F5AJ", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/X9B7F5AJ", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/X9B7F5AJ", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Codeço et al.", "parsedDate": "2007-12-22", "numChildren": 0 }, "data": { "key": "X9B7F5AJ", "version": 2226, "itemType": "journalArticle", "title": "Vaccinating in disease-free regions: a vaccine model with application to yellow fever", "creators": [ { "creatorType": "author", "firstName": "Claudia T", "lastName": "Codeço" }, { "creatorType": "author", "firstName": "Paula M", "lastName": "Luz" }, { "creatorType": "author", "firstName": "Flavio", "lastName": "Coelho" }, { "creatorType": "author", "firstName": "Alison P", "lastName": "Galvani" }, { "creatorType": "author", "firstName": "Claudio", "lastName": "Struchiner" } ], "abstractNote": "Concerns regarding natural or induced emergence of infectious diseases have raised a debate on the pros and cons of pre-emptive vaccination of populations under uncertain risk. In the absence of immediate risk, ethical issues arise because even smaller risks associated with the vaccine are greater than the immediate disease risk (which is zero). The model proposed here seeks to formalize the vaccination decision process looking from the perspective of the susceptible individual, and results are shown in the context of the emergence of urban yellow fever in Brazil. The model decomposes the individual's choice about vaccinating or not into uncertain components. The choice is modelled as a function of (i) the risk of a vaccine adverse event, (ii) the risk of an outbreak and (iii) the probability of receiving the vaccine or escaping serious disease given an outbreak. Additionally, we explore how this decision varies as a function of mass vaccination strategies of varying efficiency. If disease is considered possible but unlikely (risk of outbreak less than 0.1), delay vaccination is a good strategy if a reasonably efficient campaign is expected. The advantage of waiting increases as the rate of transmission is reduced (low R0) suggesting that vector control programmes and emergency vaccination preparedness work together to favour this strategy. The opposing strategy, vaccinating pre-emptively, is favoured if the probability of yellow fever urbanization is high or if expected R0 is high and emergency action is expected to be slow. In summary, our model highlights the nonlinear dependence of an individual's best strategy on the preparedness of a response to a yellow fever outbreak or other emergent infectious disease.", "publicationTitle": "Journal of the Royal Society, Interface / the Royal Society", "publisher": "", "place": "", "date": "Dec 22, 2007", "volume": "4", "issue": "17", "section": "", "partNumber": "", "partTitle": "", "pages": "1119-25", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "J R Soc Interface", "DOI": "M83137R11226177P", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/17442650", "accessDate": "2008-09-19T13:36:44Z", "PMID": "17442650", "PMCID": "", "ISSN": "1742-5689", "archive": "", "archiveLocation": "", "shortTitle": "Vaccinating in disease-free regions", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0011", "rights": "", "extra": "00024", "tags": [ { "tag": "Disease Outbreaks", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Models, Immunological", "type": 1 }, { "tag": "Risk", "type": 1 }, { "tag": "Urban Population", "type": 1 }, { "tag": "Yellow Fever", "type": 1 }, { "tag": "Yellow Fever Vaccine", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:38:55Z", "dateModified": "2017-11-07T18:17:03Z" } }, { "key": "V6RTVV8P", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/V6RTVV8P", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/V6RTVV8P", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Serpell and Green", "parsedDate": "2006-05-08", "numChildren": 0 }, "data": { "key": "V6RTVV8P", "version": 2226, "itemType": "journalArticle", "title": "Parental decision-making in childhood vaccination", "creators": [ { "creatorType": "author", "firstName": "Lucy", "lastName": "Serpell" }, { "creatorType": "author", "firstName": "John", "lastName": "Green" } ], "abstractNote": "Recent concerns about childhood vaccines such as the measles, mumps and rubella (MMR) vaccine have led to reduced vaccine uptake and increased probability of disease outbreaks. Psychological aspects of parental decision-making about vaccines are reviewed. Inconsistencies and gaps in the literature are highlighted and implications of what is known for public health are outlined. A decision theory model of the decision to vaccinate fits the facts well and generates practical strategies for uptake of MMR and similar childhood vaccines.", "publicationTitle": "Vaccine", "publisher": "", "place": "", "date": "May 8, 2006", "volume": "24", "issue": "19", "section": "", "partNumber": "", "partTitle": "", "pages": "4041-6", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Vaccine", "DOI": "S0264-410X(06)00219-2", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/16530892", "accessDate": "2008-10-01T12:53:53Z", "PMID": "16530892", "PMCID": "", "ISSN": "0264-410X", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0021", "rights": "", "extra": "00085", "tags": [ { "tag": "Child", "type": 1 }, { "tag": "Decision Making", "type": 1 }, { "tag": "Decision Theory", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Parents", "type": 1 }, { "tag": "Risk", "type": 1 }, { "tag": "Vaccination", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:38:55Z", "dateModified": "2017-11-07T18:17:00Z" } }, { "key": "V4CAPCGT", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/V4CAPCGT", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/V4CAPCGT", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Anderson and May", "parsedDate": "1979-08-02", "numChildren": 0 }, "data": { "key": "V4CAPCGT", "version": 2226, "itemType": "journalArticle", "title": "Population biology of infectious diseases: Part I", "creators": [ { "creatorType": "author", "firstName": "R M", "lastName": "Anderson" }, { "creatorType": "author", "firstName": "R M", "lastName": "May" } ], "abstractNote": "If the host population is taken to be a dynamic variable (rather than constant, as conventionally assumed), a wider understanding of the population biology of infectious diseases emerges. In this first part of a two-part article, mathematical models are developed, shown to fit data from laboratory experiments, and used to explore the evolutionary relations among transmission parameters. In the second part of the article, to be published in next week's issue, the models are extended to include indirectly transmitted infections, and the general implications for infectious diseases are considered.", "publicationTitle": "Nature", "publisher": "", "place": "", "date": "Aug 2, 1979", "volume": "280", "issue": "5721", "section": "", "partNumber": "", "partTitle": "", "pages": "361-367", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Nature", "DOI": "", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/460412", "accessDate": "2009-09-24T14:49:17Z", "PMID": "460412", "PMCID": "", "ISSN": "0028-0836", "archive": "", "archiveLocation": "", "shortTitle": "Population biology of infectious diseases", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "1711", "rights": "", "extra": "02608", "tags": [ { "tag": "Animals", "type": 1 }, { "tag": "Bacterial Infections", "type": 1 }, { "tag": "Communicable Diseases", "type": 1 }, { "tag": "Disease Outbreaks", "type": 1 }, { "tag": "Ectromelia, Infectious", "type": 1 }, { "tag": "Mice", "type": 1 }, { "tag": "Models, Biological", "type": 1 }, { "tag": "Pasteurella Infections", "type": 1 }, { "tag": "Population Dynamics", "type": 1 }, { "tag": "Virus Diseases", "type": 1 } ], "collections": [], "relations": { "dc:replaces": "http://zotero.org/groups/1493/items/C6V22HBA" }, "dateAdded": "2009-09-25T09:11:06Z", "dateModified": "2017-11-07T18:16:56Z" } }, { "key": "UZU39XUH", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/UZU39XUH", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/UZU39XUH", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Chapman and Coups", "parsedDate": "1999-10", "numChildren": 0 }, "data": { "key": "UZU39XUH", "version": 2226, "itemType": "journalArticle", "title": "Predictors of influenza vaccine acceptance among healthy adults", "creators": [ { "creatorType": "author", "firstName": "G B", "lastName": "Chapman" }, { "creatorType": "author", "firstName": "E J", "lastName": "Coups" } ], "abstractNote": "BACKGROUND: Previous studies investigating predictors of influenza vaccine acceptance have focused on high-risk patients or health care workers. Few studies have examined flu shot acceptance among healthy adults in workplace settings, even though influenza vaccine is recommended for this group as well. METHODS: Two studies investigated predictors of flu vaccine acceptance in workplace samples of healthy adults. In the first study, 79 university employees were interviewed, while in the second, 435 corporate employees completed a questionnaire. RESULTS: In the first study, flu shot acceptance was predicted by perceived effectiveness of the vaccine (r = 0.36), perceived likelihood of vaccine side effects (r = -0.32), and having received the shot in the previous year (r = 0.25). In the second study, flu shot acceptance was again predicted by perceived effectiveness (r = 0.49), likelihood of side effects (r = -0.31), and previous flu shot (r = 0.66) and was also related to older age (r = 0.10) and to predicted percentage of co-workers who also received the shot (r = 0.24). CONCLUSIONS: The current studies indicate that predictors of vaccine acceptance among healthy adults are similar to those identified in studies of high-risk patient populations and health care workers.", "publicationTitle": "Preventive Medicine", "publisher": "", "place": "", "date": "Oct 1999", "volume": "29", "issue": "4", "section": "", "partNumber": "", "partTitle": "", "pages": "249-62", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Prev Med", "DOI": "10547050", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/10547050", "accessDate": "2008-10-03T11:42:51Z", "PMID": "10547050", "PMCID": "", "ISSN": "0091-7435", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0125", "rights": "", "extra": "00216", "tags": [ { "tag": "Adolescent", "type": 1 }, { "tag": "Adult", "type": 1 }, { "tag": "Age Factors", "type": 1 }, { "tag": "Aged", "type": 1 }, { "tag": "Female", "type": 1 }, { "tag": "Health Knowledge, Attitudes, Practice", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Influenza Vaccines", "type": 1 }, { "tag": "Internal-External Control", "type": 1 }, { "tag": "Male", "type": 1 }, { "tag": "Middle Aged", "type": 1 }, { "tag": "Models, Psychological", "type": 1 }, { "tag": "Patient Acceptance of Health Care", "type": 1 }, { "tag": "Predictive Value of Tests", "type": 1 }, { "tag": "Questionnaires", "type": 1 }, { "tag": "Regression Analysis", "type": 1 }, { "tag": "Risk Factors", "type": 1 }, { "tag": "Universities", "type": 1 }, { "tag": "Workplace", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:38:55Z", "dateModified": "2017-11-07T18:16:54Z" } }, { "key": "UFTFAQ4X", "version": 2213, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/UFTFAQ4X", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/UFTFAQ4X", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 237886, "username": "edimar.garcia", "name": "Edimar Garcia", "links": { "alternate": { "href": "https://www.zotero.org/edimar.garcia", "type": "text/html" } } }, "creatorSummary": "Smith and Osborne", "parsedDate": "2007-01", "numChildren": 0 }, "data": { "key": "UFTFAQ4X", "version": 2213, "itemType": "journalArticle", "title": "Diversity in logarithmic opinion pools", "creators": [ { "creatorType": "author", "firstName": "Andrew", "lastName": "Smith" }, { "creatorType": "author", "firstName": "Miles", "lastName": "Osborne" } ], "abstractNote": "Conditional random fields are state-of-the-art models for sequencing tasks such as named entity recognition. However, being globally conditioned, they have a tendency to overfit to a greater extent than other sequencing models. We introduce an approach to combat this overfitting called a logarithmic opinion pool (LOP). A LOP consists of a weighted combination of constituent models. We present the theory behind LOPs, and show that effective LOPs require constituent models that are diverse from one another. We examine different ways to introduce such diversity, including an approach that involves training the constituent models together, interactively. Our results show that, as expected from the underlying theory, explicitly optimising for constituent model diversity can improve performance over standard approaches to regularisation.", "publicationTitle": "Linguisticae Investigationes", "publisher": "", "place": "", "date": "Janeiro 2007", "volume": "30", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "47, 27", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "", "citationKey": "", "url": "http://www.ingentaconnect.com/content/jbp/li/2007/00000030/00000001/art00003", "accessDate": "2009-02-09T14:57:49Z", "PMID": "", "PMCID": "", "ISSN": "0378-4169", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "CiteULike", "callNumber": "0005", "rights": "", "extra": "00006", "tags": [ { "tag": "crf", "type": 1 }, { "tag": "ner", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:38:55Z", "dateModified": "2017-11-07T18:16:51Z" } }, { "key": "T7DFMGT7", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/T7DFMGT7", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/T7DFMGT7", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Cauchemez et al.", "parsedDate": "2006-01", "numChildren": 0 }, "data": { "key": "T7DFMGT7", "version": 2226, "itemType": "journalArticle", "title": "Real-time estimates in early detection of SARS", "creators": [ { "creatorType": "author", "firstName": "Simon", "lastName": "Cauchemez" }, { "creatorType": "author", "firstName": "Pierre-Yves", "lastName": "Boelle" }, { "creatorType": "author", "firstName": "Christi A", "lastName": "Donnelly" }, { "creatorType": "author", "firstName": "Neil M", "lastName": "Ferguson" }, { "creatorType": "author", "firstName": "Guy", "lastName": "Thomas" }, { "creatorType": "author", "firstName": "Gabriel M", "lastName": "Leung" }, { "creatorType": "author", "firstName": "Anthony J", "lastName": "Hedley" }, { "creatorType": "author", "firstName": "Roy M", "lastName": "Anderson" }, { "creatorType": "author", "firstName": "Alain-Jacques", "lastName": "Valleron" } ], "abstractNote": "We propose a Bayesian statistical framework for estimating the reproduction number R early in an epidemic. This method allows for the yet-unrecorded secondary cases if the estimate is obtained before the epidemic has ended. We applied our approach to the severe acute respiratory syndrome (SARS) epidemic that started in February 2003 in Hong Kong. Temporal patterns of R estimated after 5, 10, and 20 days were similar. Ninety-five percent credible intervals narrowed when more data were available but stabilized after 10 days. Using simulation studies of SARS-like outbreaks, we have shown that the method may be used for early monitoring of the effect of control measures.", "publicationTitle": "Emerging Infectious Diseases", "publisher": "", "place": "", "date": "Jan 2006", "volume": "12", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "110-113", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "Emerging Infect. Dis", "DOI": "", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/16494726", "accessDate": "2009-09-24T15:31:10Z", "PMID": "16494726", "PMCID": "", "ISSN": "1080-6040", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0064", "rights": "", "extra": "00086", "tags": [ { "tag": "Bayes Theorem", "type": 1 }, { "tag": "Computer Simulation", "type": 1 }, { "tag": "Disease Outbreaks", "type": 1 }, { "tag": "Hong Kong", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Severe Acute Respiratory Syndrome", "type": 1 }, { "tag": "Time Factors", "type": 1 } ], "collections": [], "relations": { "dc:replaces": "http://zotero.org/groups/1493/items/AUNEJ86Z" }, "dateAdded": "2009-09-25T09:11:33Z", "dateModified": "2017-11-07T18:16:49Z" } }, { "key": "T5NCMEX9", "version": 2213, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/T5NCMEX9", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/T5NCMEX9", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 237886, "username": "edimar.garcia", "name": "Edimar Garcia", "links": { "alternate": { "href": "https://www.zotero.org/edimar.garcia", "type": "text/html" } } }, "creatorSummary": "Mckay et al.", "parsedDate": "2000-02", "numChildren": 1 }, "data": { "key": "T5NCMEX9", "version": 2213, "itemType": "journalArticle", "title": "A Comparison of Three Methods for Selecting Values of Input Variables in the Analysis of Output from a Computer Code", "creators": [ { "creatorType": "author", "firstName": "M. D.", "lastName": "Mckay" }, { "creatorType": "author", "firstName": "R. J.", "lastName": "Beckman" }, { "creatorType": "author", "firstName": "W. J.", "lastName": "Conover" } ], "abstractNote": "Two types of sampling plans are examined as alternatives to simple random sampling in Monte Carlo studies. These plans are shown to be improvements over simple random sampling with respect to variance for a class of estimators which includes the sample mean and the empirical distribution function.", "publicationTitle": "Technometrics", "publisher": "", "place": "", "date": "Feb., 2000", "volume": "42", "issue": "1", "section": "", "partNumber": "", "partTitle": "", "pages": "55-61", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "", "citationKey": "", "url": "http://www.jstor.org/stable/1271432", "accessDate": "2009-09-21T10:38:03Z", "PMID": "", "PMCID": "", "ISSN": "00401706", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "JSTOR", "callNumber": "0178", "rights": "", "extra": "00700 \nArticleType: primary_article / Issue Title: Special 40th Anniversary Issue / Full publication date: Feb., 2000 / Copyright © 2000 American Statistical Association and American Society for Quality", "tags": [ { "tag": "latin-hypercube-sampling" } ], "collections": [], "relations": { "dc:replaces": "http://zotero.org/groups/1493/items/N26S5IUU" }, "dateAdded": "2009-09-25T09:11:33Z", "dateModified": "2017-11-07T18:16:45Z" } }, { "key": "T5ES4QR8", "version": 2213, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/T5ES4QR8", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/T5ES4QR8", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 237886, "username": "edimar.garcia", "name": "Edimar Garcia", "links": { "alternate": { "href": "https://www.zotero.org/edimar.garcia", "type": "text/html" } } }, "creatorSummary": "Vyshemirsky and Girolami", "parsedDate": "2008", "numChildren": 0 }, "data": { "key": "T5ES4QR8", "version": 2213, "itemType": "journalArticle", "title": "BioBayes: A software package for Bayesian inference in systems biology", "creators": [ { "creatorType": "author", "firstName": "Vladislav", "lastName": "Vyshemirsky" }, { "creatorType": "author", "firstName": "Mark", "lastName": "Girolami" } ], "abstractNote": "Motivation: There are several levels of uncertainty involved in the mathematical modelling of biochemical systems. There often may be a degree of uncertainty about the values of kinetic parameters, about the general structure of the model and about the behaviour of biochemical species which cannot be observed directly. The methods of Bayesian inference provide a consistent framework for modelling and predicting in these uncertain conditions. We present a software package for applying the Bayesian inferential methodology to problems in systems biology. Results: Described herein is a software package, BioBayes, which provides a framework for Bayesian parameter estimation and evidential model ranking over models of biochemical systems defined using ordinary differential equations. The package is extensible allowing additional modules to be included by developers. There are no other such packages available which provide this functionality. Availability: http://www.dcs.gla.ac.uk/BioBayes/ Contact: vvv@dcs.gla.ac.uk", "publicationTitle": "Bioinformatics", "publisher": "", "place": "", "date": "Setembro 1, 2008", "volume": "24", "issue": "17", "section": "", "partNumber": "", "partTitle": "", "pages": "1933-1934", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "10.1093/bioinformatics/btn338", "citationKey": "", "url": "http://bioinformatics.oxfordjournals.org/cgi/content/abstract/24/17/1933", "accessDate": "2009-10-19T13:16:54Z", "PMID": "", "PMCID": "", "ISSN": "", "archive": "", "archiveLocation": "", "shortTitle": "BioBayes", "language": "", "libraryCatalog": "HighWire", "callNumber": "0021", "rights": "", "extra": "00042", "tags": [], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:39:27Z", "dateModified": "2017-11-07T18:16:43Z" } }, { "key": "RB6XVW3D", "version": 2226, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/RB6XVW3D", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/RB6XVW3D", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 25327, "username": "Jari Haukka", "name": "Jari Haukka", "links": { "alternate": { "href": "https://www.zotero.org/jari_haukka", "type": "text/html" } } }, "creatorSummary": "Goldacre", "parsedDate": "2007-07-21", "numChildren": 0 }, "data": { "key": "RB6XVW3D", "version": 2226, "itemType": "journalArticle", "title": "Medicine and the media: MMR: the scare stories are back", "creators": [ { "creatorType": "author", "firstName": "Ben", "lastName": "Goldacre" } ], "abstractNote": "", "publicationTitle": "BMJ (Clinical Research Ed.)", "publisher": "", "place": "", "date": "Jul 21, 2007", "volume": "335", "issue": "7611", "section": "", "partNumber": "", "partTitle": "", "pages": "126-7", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "BMJ", "DOI": "bmj.39280.447419.59", "citationKey": "", "url": "http://www.ncbi.nlm.nih.gov/pubmed/17634177", "accessDate": "2008-09-19T13:33:54Z", "PMID": "17634177", "PMCID": "", "ISSN": "1468-5833", "archive": "", "archiveLocation": "", "shortTitle": "Medicine and the media", "language": "", "libraryCatalog": "NCBI PubMed", "callNumber": "0014", "rights": "", "extra": "00024", "tags": [ { "tag": "Autistic Disorder", "type": 1 }, { "tag": "Child", "type": 1 }, { "tag": "Data Collection", "type": 1 }, { "tag": "Humans", "type": 1 }, { "tag": "Measles-Mumps-Rubella Vaccine", "type": 1 }, { "tag": "Newspapers", "type": 1 }, { "tag": "Prevalence", "type": 1 } ], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:38:55Z", "dateModified": "2017-11-07T18:16:41Z" } }, { "key": "P5I3UW76", "version": 2213, "library": { "type": "group", "id": 1493, "name": "epidemiology", "links": { "alternate": { "href": "https://www.zotero.org/groups/epidemiology", "type": "text/html" } } }, "links": { "self": { "href": "https://api.zotero.org/groups/1493/items/P5I3UW76", "type": "application/json" }, "alternate": { "href": "https://www.zotero.org/groups/epidemiology/items/P5I3UW76", "type": "text/html" } }, "meta": { "createdByUser": { "id": 27767, "username": "fccoelho", "name": "Flávio Codeço Coelho", "links": { "alternate": { "href": "https://www.zotero.org/fccoelho", "type": "text/html" } } }, "lastModifiedByUser": { "id": 237886, "username": "edimar.garcia", "name": "Edimar Garcia", "links": { "alternate": { "href": "https://www.zotero.org/edimar.garcia", "type": "text/html" } } }, "creatorSummary": "Lepiniec et al.", "parsedDate": "1994", "numChildren": 0 }, "data": { "key": "P5I3UW76", "version": 2213, "itemType": "journalArticle", "title": "Geographic distribution and evolution of yellow fever viruses based on direct sequencing of genomic cDNA fragments", "creators": [ { "creatorType": "author", "firstName": "Loic", "lastName": "Lepiniec" }, { "creatorType": "author", "firstName": "Lynn", "lastName": "Dalgarno" }, { "creatorType": "author", "firstName": "Vu Thi Que", "lastName": "Huong" }, { "creatorType": "author", "firstName": "Thomas P.", "lastName": "Monath" }, { "creatorType": "author", "firstName": "Jean-Pierre", "lastName": "Digoutte" }, { "creatorType": "author", "firstName": "Vincent", "lastName": "Deubel" } ], "abstractNote": "We have compared the nucleotide sequence of an envelope protein gene fragment encoding amino acids 291 to 406 of 22 yellow fever (YF) virus strains of diverse geographic and host origins isolated over a 63 year time span. The nucleotide fragment of viral RNA was examined by direct sequencing of a PCR product derived from complementary DNA. Alignment with the prototype Asibi strain sequence showed divergence of 0 to 21.5% corresponding to a maximum of 5.2% divergence in the amino acid sequence. Taking 10% nucleotide divergence as a cut-off point, the 22 YF virus strains fell into three topotypes which corresponded to different geographical areas, namely West Africa, Central-East Africa, and South America. Two subgroups were defined in West Africa, a genotypic group circulating in the sylvatic zone of the western part of Africa, from western Ivory Coast-Mali to Senegal, and a group responsible for large outbreaks from eastern Ivory Coast-Burkina Faso to Cameroon. Strains from Central-East Africa showed a low ratio of transition:transversion of about 1 instead of 8 to 10 for other strains, when their nucleotide sequences were compared with those of other African strains. This may reflect a more distant relationship between the former strains and the others. No change was observed in the highly conserved amino acid domain encompassing the TGD sequence, and important determinant of flavivirus tropism and pathogenesis. Our results support earlier observations on the genetic relationships between YF isolates established by T1 oligonucleotide fingerprinting and offer a useful tool for the understanding of YF virus distribution and evolution.", "publicationTitle": "J Gen Virol", "publisher": "", "place": "", "date": "Fevereiro 1, 1994", "volume": "75", "issue": "2", "section": "", "partNumber": "", "partTitle": "", "pages": "417-423", "series": "", "seriesTitle": "", "seriesText": "", "journalAbbreviation": "", "DOI": "10.1099/0022-1317-75-2-417", "citationKey": "", "url": "http://vir.sgmjournals.org/cgi/content/abstract/75/2/417", "accessDate": "2008-09-26T15:12:23Z", "PMID": "", "PMCID": "", "ISSN": "", "archive": "", "archiveLocation": "", "shortTitle": "", "language": "", "libraryCatalog": "HighWire", "callNumber": "0057", "rights": "", "extra": "00063", "tags": [], "collections": [], "relations": {}, "dateAdded": "2010-03-04T12:37:59Z", "dateModified": "2017-11-07T18:16:39Z" } } ]